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Miscellaneous
Each of the 371 databases of BioCyc describes the genome and metabolic pathways of a single organism. The BioCyc databases are divided into 3 tiers, based on their quality: Tier 1: 3 Databases, which have been created through intensive manual efforts and receive continuous updating: 1) *EcoCyc* describes the model organism Escherichia coli K-12. 2) *MetaCyc* describes metabolic pathways and enzymes for more than 1,500 organisms. 3) *BOCD* (BioCyc Open Compounds Database) is an open collection of chemical compound data from the BioCyc databases. BOCD includes metabolites, enzyme activators, inhibitors, and cofactors. Tier 2: 20 Databases, which were computationally generated and have undergone moderate curation. Tier 3: 349 Databases, which were also computationally generated, but have undergone no curation. Scientists can use the BioCyc Web site to visualize individual metabolic pathways or to view the complete metabolic map of an organism. The latter diagram can be used to analyze gene expression, proteomics, or metabolomics data, such as to produce animated views of time-course gene-expression experiments. The BioCyc Web site also provides genome browsing capabilities, and for the *EcoCyc* databases in particular, provides extensive information about transcriptional mechanisms of gene regulation.
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Fulltext Database • Reference Database
The Digital Library of the Commons (DLC) is a gateway to the international literature on the commons. The DLC provides free and open access to full-text articles, papers, and dissertations. This site contains an author-submission portal; an Image Database; the Comprehensive Bibliography of the Commons; a Keyword Thesaurus, and links to relevant reference sources on the study of the commons.
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Reference Database • External Library Catalog • Miscellaneous
LIVIVO bundles scientifically relevant resources from the subjects fields medicine, health, nutrition, environmental and agricultural sciences. It provides a common search interface over various data sources, such as library catalogs, specialist bibliographic databases, full texts from journals, and quality-controlled web content. LIVIVO combines the former ZB MED search portals MEDPILOT (2003 to 2015) and GREENPILOT (2009 to 2015).
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Miscellaneous
NMRShiftDB is a web database for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (currently only for carbon) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users.
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Reference Database • Journal Collection
ScienceOpen is a networking platform for scholars to enhance their research in the open, make an impact, and receive credit for it. The site provides advanced search and discovery functions, combined with post-publication peer review, recommendation, social sharing, and collection-building features. The Max Planck Society covers article-processing charges for ScienceOpen Research and ScienceOpen Poster centrally. Further details are available on the MPDL website.
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Miscellaneous
The MPI-Mainz-UV-VIS Spectral Atlas is a comprehensive collection of absorption cross sections for gaseous molecules and radicals, primarily relevant to atmospheric research, from measurements performed during the last nine decades. The individual data sets were collected from the original publications, either copied from tabulations, or read from figures in those cases where numerical data could no longer be obtained. Other sources rely on the internal databases of several research centers dealing with atmospheric chemistry and/or molecular spectroscopy. Numerous excellent high-resolution spectra were obtained from personal communications with the scientists.
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Miscellaneous
Zenodo is an open data repository, developed and operated by CERN. It is an catch-all repository, that welcomes research from all over the world, and from every discipline. Zenodo does not impose any requirements on format, size, access restrictions or licence. A digital object identifier (DOI) is automatically assigned to all Zenodo files and it is integrated into reporting for research funded by the European Commission.