Each of the 371 databases of BioCyc describes the genome and metabolic pathways of a single organism. The BioCyc databases are divided into 3 tiers, based on their quality: Tier 1: 3 Databases, which have been created through intensive manual efforts and receive continuous updating: 1) *EcoCyc* describes the model organism Escherichia coli K-12. 2) *MetaCyc* describes metabolic pathways and enzymes for more than 1,500 organisms. 3) *BOCD* (BioCyc Open Compounds Database) is an open collection of chemical compound data from the BioCyc databases. BOCD includes metabolites, enzyme activators, inhibitors, and cofactors. Tier 2: 20 Databases, which were computationally generated and have undergone moderate curation. Tier 3: 349 Databases, which were also computationally generated, but have undergone no curation. Scientists can use the BioCyc Web site to visualize individual metabolic pathways or to view the complete metabolic map of an organism. The latter diagram can be used to analyze gene expression, proteomics, or metabolomics data, such as to produce animated views of time-course gene-expression experiments. The BioCyc Web site also provides genome browsing capabilities, and for the *EcoCyc* databases in particular, provides extensive information about transcriptional mechanisms of gene regulation.
Welcome to CogPrints, an electronic archive for self-archive papers in any area of Psychology, neuroscience, and Linguistics, and many areas of Computer Science (e.g., artificial intelligence, robotics, vision, learning, speech, neural networks), Philosophy (e.g., mind, language, knowledge, science, logic), Biology (e.g., ethology, behavioral ecology, sociobiology, behaviour genetics, evolutionary theory), Medicine (e.g., Psychiatry, Neurology, human genetics, Imaging), Anthropology (e.g., primatology, cognitive ethnology, archeology, paleontology), as well as any other portions of the physical, social and mathematical sciences that are pertinent to the study of cognition.
EMBL-EBI maintains the world’s most comprehensive range of freely available and up-to-date molecular databases. Developed in collaboration with institutions worldwide, the EMBL-EBI services let you share data, perform complex queries and analyse the results in different ways. You can work locally by downloading the data and software, or use the web services to access EMBL-EBI resources programmatically.
Reference Database • External Library Catalog • Miscellaneous
LIVIVO bundles scientifically relevant resources from the subjects fields medicine, health, nutrition, environmental and agricultural sciences. It provides a common search interface over various data sources, such as library catalogs, specialist bibliographic databases, full texts from journals, and quality-controlled web content. LIVIVO combines the former ZB MED search portals MEDPILOT (2003 to 2015) and GREENPILOT (2009 to 2015).
NMRShiftDB is a web database for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (currently only for carbon) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users.
The vifabio portal offers rapid access to biological literature and information. It offers a parallel search in various biologically relevant library catalogues, bibliographic databases, and the internet guide (a collection of selected, quality controlled internet sources).